BCO App User Manual
Welcome to the BCO App
1
Introduction
2
BioCompute Objects
2.1
BCO App Overview
2.2
Menu Options
2.3
Installing and Accessing the BCO App
2.3.1
Containerized app
2.3.2
Cancer Genomics Cloud hosted app
2.4
Getting Started with the BCO App
2.4.1
Login Page (Deployment Specific)
2.4.2
Landing Page
2.5
Generating BioCompute Objects with BCO App
2.5.1
Platform Composer
2.5.2
Step 1 - Import the Target CWL App
2.5.3
Step 2 - Provenance, Usability, and Extension Domains
2.5.4
Step 3 - Execution and Parametric Domains
2.5.5
Step 4 - Description Domain
2.5.6
Step 5 - I/O and Error Domain
2.5.7
Step 6 - Review and Export
2.6
BioCompute Object Utilities
2.6.1
BioCompute Object (BCO) Validator
2.6.2
Interactive BCO Browser
Appendix I : Platform Authentication Guide
Authentication Token
Locate Authentication Token
Appendix II: BioCompute Object Domains
Top Level Field
Provenance Domain
Usability Domain
Extension Domain
Description Domain
Execution Domain
Parametric Domain
Input Output Domain
Error Domain
© 2020 Seven Bridges
BioCompute Object App User Manual
Appendix II: BioCompute Object Domains
This section summarizes the domains defined in the BioCompute Object specification (v1.3.0).