Non-default parameters customizing the computational flow which can affect the output of the calculations (domain definition).

compose_parametric_v1.3.0(df = NULL)

compose_parametric(df = NULL)

Arguments

df

Data frame. Variables include param (parameter names), value (value of the parameters), and step (step number for each parameter).

Value

A list of class bco.domain

Examples

df_parametric <- data.frame( "param" = c( "seed", "minimum_match_len", "divergence_threshold_percent", "minimum_coverage", "freq_cutoff" ), "value" = c("14", "66", "0.30", "15", "0.10"), "step" = c(1, 1, 1, 2, 2) ) compose_parametric(df_parametric) %>% convert_json()
#> [ #> { #> "param": "seed", #> "value": "14", #> "step": "1" #> }, #> { #> "param": "minimum_match_len", #> "value": "66", #> "step": "1" #> }, #> { #> "param": "divergence_threshold_percent", #> "value": "0.30", #> "step": "1" #> }, #> { #> "param": "minimum_coverage", #> "value": "15", #> "step": "2" #> }, #> { #> "param": "freq_cutoff", #> "value": "0.10", #> "step": "2" #> } #> ]